Smo78458 (PACid_15421449)


Aliases : PACid_15421449

Description : 27.3.99 RNA.regulation of transcription.unclassified Eukaryotic aspartyl protease family protein FUNCTIONS IN: aspartic-type endopeptidase activity INVOLVED IN: proteolysis CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461) BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G42980.1) Has 661 Blast hits to 418 proteins in 24 species: Archae - 0 Bacteria - 0 Metazoa - 16 Fungi - 4 Plants - 631 Viruses - 0 Other Eukaryotes - 10 (source: NCBI BLink). & (loc_os02g21040.1 : 225.0


Gene families : OG_01_0002029 (Gene family) Phylogenetic Tree(s): OG0002029_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo78458
Cluster HCCA cluster: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Zm00001d009510 GRMZM2G128333 29.5.4 protein.degradation.aspartate protease Eukaryotic... 0.03 Gene family
Zm00001d038969 GRMZM2G381739 29.5.4 protein.degradation.aspartate protease Eukaryotic... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032861 TAXi_N 27 217
No external refs found!