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  5. Msp_g24446

Msp_g24446 (ERD3)


Aliases : ERD3

Description : not classified & original description: none


Gene families : OG0002831 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002831_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g24446
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT4G19120 ERD3 S-adenosyl-L-methionine-dependent methyltransferases... 0.01 OrthoFinder output from all 47 species
Aev_g42172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04477 ERD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G040600.1 ERD3, Ceric.02G040600 not classified & original description: pacid=50585333... 0.04 OrthoFinder output from all 47 species
Dcu_g14590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022775001 No alias Probable methyltransferase PMT20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_21032 No alias Probable methyltransferase PMT20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g14150.1 LOC_Os04g14150 Probable methyltransferase PMT20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g06593 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp8g02860.1 ERD3 Probable methyltransferase PMT20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g07315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0205.g025719 ERD3 not classified & original description: CDS=1-1914 0.03 OrthoFinder output from all 47 species
Sam_g24695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37206 ERD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 78 585
No external refs found!