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  5. Msp_g24306

Msp_g24306


Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g24306
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Aev_g06031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19121.t1 ORF158, Aspi01Gene19121 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33174.t1 Aspi01Gene33174 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35421.t1 ORF158, Aspi01Gene35421 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61025.t1 Aspi01Gene61025 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62385.t1 ORF158, Aspi01Gene62385 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62386.t1 ORF158, Aspi01Gene62386 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000881.27 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.01 OrthoFinder output from all 47 species
Cre11.g467733 No alias RNA-directed DNA polymerase homolog OS=Oenothera berteroana 0.01 OrthoFinder output from all 47 species
Dac_g28319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g46099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10706 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 OrthoFinder output from all 47 species
Len_g27933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14374 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 151 310
No external refs found!