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  5. Msp_g23995

Msp_g23995


Description : not classified & original description: none


Gene families : OG0003261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g23995
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00083380 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G23110 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.07 OrthoFinder output from all 47 species
Adi_g104696 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01012044001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_03748 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g23928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436421g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_29192g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g01480.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012473 No alias not classified & original description: CDS=205-14337 0.03 OrthoFinder output from all 47 species
Solyc02g014180.2.1 Solyc02g014180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g22652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!