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  5. Msp_g23949

Msp_g23949


Description : not classified & original description: none


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g23949

Target Alias Description ECC score Gene Family Method Actions
Adi_g025859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0226.g058986 No alias not classified & original description: CDS=214-2052 0.03 OrthoFinder output from all 47 species
Cba_g09068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G051600.1 Ceric.01G051600 not classified & original description: pacid=50592490... 0.05 OrthoFinder output from all 47 species
Ceric.25G014900.1 Ceric.25G014900 not classified & original description: pacid=50594354... 0.02 OrthoFinder output from all 47 species
Ceric.25G071400.1 Ceric.25G071400 not classified & original description: pacid=50593370... 0.04 OrthoFinder output from all 47 species
Dcu_g02839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15768 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g03584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16481 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g16482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08627 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 15 80
IPR000504 RRM_dom 104 164
IPR000504 RRM_dom 524 578
No external refs found!