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  5. Msp_g23240

Msp_g23240 (UBQ4)


Aliases : UBQ4

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g23240

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00161810 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
Als_g33040 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.07 OrthoFinder output from all 47 species
Als_g59298 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g79067 UBQ11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.03G010600.1 UBQ14, Ceric.03G010600 UBQ ubiquitin-fold protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z299200.1 UBQ3, Ceric.1Z299200 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G048500.1 UBQ11, Ceric.24G048500 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G038000.1 UBQ3, Ceric.29G038000 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g05526 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g45400.1 RUB1, ATRUB1,... ubiquitin-fold protein (UBQ). ubiquitin-fold protein (RUB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g08700.1 LOC_Os08g08700 Polyubiquitin 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_14427g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
MA_4040g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
MA_53043g0010 RUB1, ATRUB1, NEDD8 ubiquitin-fold protein (UBQ). ubiquitin-fold protein (RUB) 0.03 OrthoFinder output from all 47 species
Ore_g34037 UBQ12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g35753 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Smo271198 UBQ4 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Zm00001e010317_P001 Zm00001e010317 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e035030_P001 Zm00001e035030 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 1 52
IPR000626 Ubiquitin-like_dom 57 128
IPR000626 Ubiquitin-like_dom 133 204
IPR000626 Ubiquitin-like_dom 209 280
No external refs found!