Smo77589 (PACid_15419489)


Aliases : PACid_15419489

Description : 29.2.1.2.1.26 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S26 Ribosomal protein S26e family protein FUNCTIONS IN: structural constituent of ribosome INVOLVED IN: translation, ribosome biogenesis LOCATED IN: cytosolic small ribosomal subunit, ribosome EXPRESSED IN: pollen tube CONTAINS InterPro DOMAIN/s: Ribosomal protein S26e (InterPro:IPR000892) BEST Arabidopsis thaliana protein match is: Ribosomal protein S26e family protein (TAIR:AT2G40510.1) Has 766 Blast hits to 766 proteins in 273 species: Archae - 53 Bacteria - 0 Metazoa - 312 Fungi - 152 Plants - 120 Viruses - 0 Other Eukaryotes - 129 (source: NCBI BLink). & (p49216|rs26_orysa : 115.0


Gene families : OG_01_0002448 (Gene family) Phylogenetic Tree(s): OG0002448_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo77589
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT2G40510 No alias Ribosomal protein S26e family protein 0.08 Gene family
AT2G40590 No alias Ribosomal protein S26e family protein 0.03 Gene family
AT3G56340 No alias Ribosomal protein S26e family protein 0.07 Gene family
Cpa|evm.model.tig00001486.9 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.06 Gene family
Cre16.g682300 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.2 Gene family
GSVIVT01024576001 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.03 Gene family
GSVIVT01032696001 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os01g60790 Os01g0823300 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.12 Gene family
LOC_Os05g39960 Os05g0477300 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.09 Gene family
MA_114136g0010 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.02 Gene family
MA_74546g0010 No alias 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.02 Gene family
Solyc04g008810.3.1 Solyc04g008810.3 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.12 Gene family
Solyc06g007470.3.1 Solyc06g007470.3 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.08 Gene family
Zm00001d010614 GRMZM5G827266 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.1 Gene family
Zm00001d012992 GRMZM5G899149 No description available 0.11 Gene family
Zm00001d034609 GRMZM2G129015 29.2.1.2.1.26 protein.synthesis.ribosomal... 0.1 Gene family

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 105
No external refs found!