Msp_g22768


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g22768

Target Alias Description ECC score Gene Family Method Actions
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.06 OrthoFinder output from all 47 species
Adi_g014778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g049071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000996 OTP84 not classified & original description: CDS=1-3012 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034605 No alias ssDNA-binding protein *(OSB) & original description: CDS=21-2777 0.04 OrthoFinder output from all 47 species
Azfi_s0082.g038688 No alias not classified & original description: CDS=1-3078 0.04 OrthoFinder output from all 47 species
Cba_g02701 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29381 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.04 OrthoFinder output from all 47 species
GSVIVT01012461001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
GSVIVT01033735001 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.04 OrthoFinder output from all 47 species
Len_g12661 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18055 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18287 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25458 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g55833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14103 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64685 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012960 No alias not classified & original description: CDS=516-2783 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015358 No alias not classified & original description: CDS=223-2631 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018986 No alias not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021130 No alias not classified & original description: CDS=1-2961 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022971 No alias not classified & original description: CDS=343-1173 0.02 OrthoFinder output from all 47 species
Sam_g39339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo74842 OTP86 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Solyc09g015370.1.1 Solyc09g015370 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Spa_g44998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 30 76
IPR002885 Pentatricopeptide_repeat 132 178
IPR002885 Pentatricopeptide_repeat 233 281
IPR002885 Pentatricopeptide_repeat 104 128
IPR002885 Pentatricopeptide_repeat 210 231
No external refs found!