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  5. Cre06.g306850

Cre06.g306850


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase


Gene families : OG_01_0002890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g306850
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000203.32 No alias RNA processing.messenger ribonucleoprotein particle... 0.04 Archaeplastida
MA_932318g0010 No alias ligand-gated cation channel (GLR) 0.01 Archaeplastida
Mp6g02580.1 No alias DBP5/LOS4 ATP-dependent helicase 0.03 Archaeplastida
Pp3c7_14910V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 Archaeplastida
Smo160867 No alias RNA processing.messenger ribonucleoprotein particle... 0.04 Archaeplastida
Smo447130 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
Solyc04g082790.4.1 No alias DBP5/LOS4 ATP-dependent helicase 0.01 Archaeplastida
Solyc10g085790.2.1 No alias DBP5/LOS4 ATP-dependent helicase 0.02 Archaeplastida
Zm00001e000442_P003 No alias DBP5/LOS4 ATP-dependent helicase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 131 302
IPR001650 Helicase_C 343 456
No external refs found!