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  5. Msp_g21663

Msp_g21663 (LZF1, STH3, DBB3)


Aliases : LZF1, STH3, DBB3

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g21663

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00204180 STO,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G06040 STO B-box zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.03 OrthoFinder output from all 47 species
AT2G31380 STH salt tolerance homologue 0.04 OrthoFinder output from all 47 species
AT2G47890 No alias B-box type zinc finger protein with CCT domain 0.03 OrthoFinder output from all 47 species
AT4G38960 No alias B-box type zinc finger family protein 0.06 OrthoFinder output from all 47 species
Adi_g057496 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081465 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04775 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13138 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19677 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14676 STO BBX class-IV transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g28425 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08244 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01696 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19117 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45209.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62651.t2 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008055 LZF1, STH3, DBB3 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009705 No alias BBX class-IV transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0185.g056620 STO BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g01876 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G005800.1 STO, Ceric.17G005800 BBX class-IV transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.39G035500.1 Ceric.39G035500 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g09412 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02213 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024173001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43170.1 LOC_Os02g43170 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g41560.2 STO, LOC_Os04g41560 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g11510.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g10660.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Lfl_g16106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g05940.1 No alias transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Nbi_g02898 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10682 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19854 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65956 No alias BBX class-IV transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16992 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39847 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Smo271535 STO RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Solyc01g110370.4.1 Solyc01g110370 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Solyc12g005420.2.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Solyc12g089240.2.1 STH2, Solyc12g089240 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Spa_g56808 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010221_P001 Zm00001e010221 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 55 97
No external refs found!