Msp_g21339

Description : not classified & original description: none

Gene families : OG0001081 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001081_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g21339
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method	Actions
Aspi01Gene00064.t1	Aspi01Gene00064	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene37983.t1	Aspi01Gene37983	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	2519	2619
IPR041577	RT_RNaseH_2	2090	2188
IPR041588	Integrase_H2C2	2450	2504
IPR041588	Integrase_H2C2	2321	2378
IPR005162	Retrotrans_gag_dom	440	529
IPR001878	Znf_CCHC	791	807
IPR000477	RT_dom	1870	2029

External Links

No external refs found!