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  5. Msp_g21090

Msp_g21090


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g21090

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.04 OrthoFinder output from all 47 species
AMTR_s00098p00167700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g50390,... 0.05 OrthoFinder output from all 47 species
Adi_g128510 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21218 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27844 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G029900.1 Ceric.10G029900 not classified & original description: pacid=50612941... 0.05 OrthoFinder output from all 47 species
Dac_g30103 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g45650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39512 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g25136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41520 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g23306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01739 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44754 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g46731 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55537 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 69
IPR046848 E_motif 141 189
IPR002885 Pentatricopeptide_repeat 89 121
No external refs found!