Msp_g21075 (PUM7, APUM7)

Aliases : PUM7, APUM7

Description : not classified & original description: none

Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g21075

Target	Alias	Description	ECC score	Gene Family Method	Actions
Azfi_s0040.g026500	APUM12, PUM12	not classified & original description: CDS=1-2874	0.03	OrthoFinder output from all 47 species
Pnu_g20896	APUM12, PUM12	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	616	646
IPR001313	Pumilio_RNA-bd_rpt	580	614
IPR001313	Pumilio_RNA-bd_rpt	765	783
IPR001313	Pumilio_RNA-bd_rpt	799	833
IPR001313	Pumilio_RNA-bd_rpt	657	684
IPR001313	Pumilio_RNA-bd_rpt	692	722
IPR001313	Pumilio_RNA-bd_rpt	727	760
IPR001313	Pumilio_RNA-bd_rpt	837	854

External Links

No external refs found!