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  5. Msp_g20824

Msp_g20824


Description : component *(CWC22) of MAC spliceosome-associated complex & original description: none


Gene families : OG0004452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20824
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT1G80930 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g056632 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Adi_g107297 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ceric.1Z119600.1 Ceric.1Z119600 component *(CWC22) of MAC spliceosome-associated complex... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000169.28 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01026760001 No alias No description available 0.02 OrthoFinder output from all 47 species
Mp2g22570.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g44880 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Tin_g28150 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Zm00001e039666_P001 Zm00001e039666 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 827 932
No external refs found!