Msp_g20617


Description : not classified & original description: none


Gene families : OG0004278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20617
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Als_g23432 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g55725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59125 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g21511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27085 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g53390 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g70747 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g70748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g06158 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g31174 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g31504 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dac_g45480 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g45935 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g18166 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g23723 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17361 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g65709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14066 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29340 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57845 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g16761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!