Msp_g20483


Description : not classified & original description: none


Gene families : OG0000414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20483
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Adi_g005249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g072200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g090377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g124954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22001 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g26418 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g35609 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36110 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38277 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23632 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23880 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68062 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20434 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g37263 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g45285 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g12184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13893 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g14955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g07380 DOT4 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g20588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29007 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46025 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g25809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54578 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g59799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g30332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14149 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g14569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44544 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g44765 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g44947 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55734 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17753 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22793 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30371 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g32741 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 91 139
IPR002885 Pentatricopeptide_repeat 168 192
IPR002885 Pentatricopeptide_repeat 66 90
No external refs found!