Msp_g20406 (MCM4)

Aliases : MCM4

Description : component *(MCM4) of MCM replicative DNA helicase complex & original description: none

Gene families : OG0001056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g20406

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00128450	MCM4,...	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.02	OrthoFinder output from all 47 species
AT4G02060	MCM7, PRL	Minichromosome maintenance (MCM2/3/5) family protein	0.03	OrthoFinder output from all 47 species
Als_g03794	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Aop_g23244	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Aspi01Gene22827.t1	MCM4, Aspi01Gene22827	component *(MCM4) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Aspi01Gene25633.t1	MCM4, Aspi01Gene25633	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene25932.t1	MCM7, PRL,...	component *(MCM7) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Azfi_s0544.g076399	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Dac_g14939	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Dac_g15991	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Gb_35205	MCM7, PRL	component MCM7 of MCM replicative DNA helicase complex	0.02	OrthoFinder output from all 47 species
LOC_Os01g36390.1	MCM4, LOC_Os01g36390	component MCM4 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
LOC_Os12g37400.1	MCM7, PRL, LOC_Os12g37400	component MCM7 of MCM replicative DNA helicase complex	0.04	OrthoFinder output from all 47 species
MA_10426237g0010	MCM7, PRL	component MCM7 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
MA_10434231g0010	MCM4	DNA replication licensing factor MCM4 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Mp2g02600.1	MCM7, PRL	component MCM7 of MCM replicative DNA helicase complex	0.04	OrthoFinder output from all 47 species
Mp3g02380.1	MCM4	component MCM4 of MCM replicative DNA helicase complex	0.02	OrthoFinder output from all 47 species
Mp4g02430.1	MCM9	component MCM9 of MCM8-9 cell cycle auxiliary complex	0.03	OrthoFinder output from all 47 species
Nbi_g03098	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Nbi_g04377	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Ore_g29782	MCM9	component *(MCM9) of MCM8-9 cell cycle auxiliary complex...	0.02	OrthoFinder output from all 47 species
Ppi_g25980	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Sam_g06717	No alias	component *(MCM4) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Sam_g09734	No alias	component *(MCM7) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Solyc01g079500.4.1	MCM7, PRL, Solyc01g079500	component MCM7 of MCM replicative DNA helicase complex	0.04	OrthoFinder output from all 47 species
Spa_g10751	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Spa_g11927	MCM7, PRL	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g06082	MCM7, PRL	component *(MCM7) of MCM replicative DNA helicase...	0.05	OrthoFinder output from all 47 species
Tin_g12164	MCM4	component *(MCM4) of MCM replicative DNA helicase...	0.04	OrthoFinder output from all 47 species
Zm00001e002873_P001	MCM7, PRL, Zm00001e002873	component MCM7 of MCM replicative DNA helicase complex	0.03	OrthoFinder output from all 47 species
Zm00001e018214_P001	MCM7, PRL, Zm00001e018214	component MCM7 of MCM replicative DNA helicase complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027925	MCM_N	148	237
IPR001208	MCM_dom	437	659
IPR041562	MCM_lid	675	761
IPR033762	MCM_OB	244	373

External Links

No external refs found!

Msp_g20406 (MCM4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation