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  5. Smo75978

Smo75978 (PACid_15416667)


Aliases : PACid_15416667

Description : 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family Encodes a putative c-myb-like transcription factor with three MYB repeats. PC-MYB1 CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930) BEST Arabidopsis thaliana protein match is: myb domain protein 3r-4 (TAIR:AT5G11510.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (loc_os12g13570.1 : 225.0


Gene families : OG_01_0000044 (Gene family) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo75978
Cluster HCCA cluster: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 Gene family
Cpa|evm.model.tig00021108.38 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
LOC_Os05g38460 Os05g0459000 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d012379 GRMZM2G169316 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 98 141
No external refs found!