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  5. Msp_g20277

Msp_g20277 (ATATG2, ATG2)


Aliases : ATATG2, ATG2

Description : component *(ATG2) of autophagosome ATG9-2-18 membrane shuttling complex & original description: none


Gene families : OG0003168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003168_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20277
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00106330 ATATG2, ATG2,... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 OrthoFinder output from all 47 species
AT3G19190 ATATG2, ATG2 autophagy 2 0.05 OrthoFinder output from all 47 species
Ala_g05089 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.08 OrthoFinder output from all 47 species
Aop_g18064 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Aspi01Gene01683.t1 ATATG2, ATG2,... component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Cba_g11381 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.06 OrthoFinder output from all 47 species
Ceric.01G052200.1 ATATG2, ATG2,... component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Dcu_g06530 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.06 OrthoFinder output from all 47 species
GSVIVT01031759001 ATATG2, ATG2 Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 OrthoFinder output from all 47 species
Len_g21121 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Lfl_g07446 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.08 OrthoFinder output from all 47 species
MA_10433793g0020 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
MA_10433793g0030 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
Mp6g18570.1 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Nbi_g05017 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Pir_g15809 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ppi_g08254 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Sam_g11595 No alias component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Solyc01g108160.3.1 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Spa_g47522 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.09 OrthoFinder output from all 47 species
Zm00001e030944_P001 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Zm00001e036789_P001 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR015412 Atg2/VPS13_C 1881 1972
IPR026854 VPS13-like_N 22 121
IPR026885 ATG2_mid_RBG 1205 1285
No external refs found!