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Msp_g20002


Description : not classified & original description: none


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00168770 evm_27.TU.AmTr_v1... Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G36040 No alias Chaperone DnaJ-domain superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g010204 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00729 J20 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0024.g020416 No alias not classified & original description: CDS=52-738 0.03 OrthoFinder output from all 47 species
Gb_09518 ATDJC39, ARL2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g20430.1 J20 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g00356 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 98 161
No external refs found!