Msp_g19745 (UBP1B)

Aliases : UBP1B

Description : stress granule assembly factor *(UBP1) & original description: none

Gene families : OG0002014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g19745

Target	Alias	Description	ECC score	Gene Family Method
Aop_g65747	UBP1B	stress granule assembly factor *(UBP1) & original...	0.04	OrthoFinder output from all 47 species
Dde_g00630	No alias	stress granule assembly factor *(UBP1) & original...	0.03	OrthoFinder output from all 47 species
Len_g36051	UBP1B	stress granule assembly factor *(UBP1) & original...	0.03	OrthoFinder output from all 47 species
Pir_g61152	UBP1B	stress granule assembly factor *(UBP1) & original...	0.03	OrthoFinder output from all 47 species
Sam_g14776	No alias	stress granule assembly factor *(UBP1) & original...	0.05	OrthoFinder output from all 47 species
Sam_g25420	No alias	stress granule assembly factor *(UBP1) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
MF	GO:0032977	membrane insertase activity	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140597	protein carrier chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	380	450
IPR000504	RRM_dom	295	360
IPR000504	RRM_dom	481	547

External Links

No external refs found!