Msp_g19695 (EIN5, AIN1, XRN4, ATXRN4)

Aliases : EIN5, AIN1, XRN4, ATXRN4

Description : exoribonuclease *(XRN4) & original description: none

Gene families : OG0000769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g19695

Target	Alias	Description	ECC score	Gene Family Method
Adi_g021456	XRN3, AtXRN3	exoribonuclease *(XRN4) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g17886	XRN3, AtXRN3	exoribonuclease *(RAT1/XRN2) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g11344	XRN3, AtXRN3	exoribonuclease *(RAT1/XRN2) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g15355	XRN3, AtXRN3	exoribonuclease *(RAT1/XRN2) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.07G019600.1	XRN3, AtXRN3,...	not classified & original description: pacid=50626131...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001164.7	XRN3, AtXRN3	5-3 exoribonuclease 4 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Len_g17366	EIN5, AIN1, XRN4, ATXRN4	exoribonuclease *(XRN4) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g03203	XRN2, AtXRN2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g10345	XRN3, AtXRN3	exoribonuclease *(XRN4) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041412	Xrn1_helical	349	449
IPR041412	Xrn1_helical	237	341
IPR004859	Xrn1_N	1	163

External Links

No external refs found!