Msp_g19405


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19405

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00182540 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00228270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
AMTR_s00065p00033910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49740... 0.02 OrthoFinder output from all 47 species
AT3G28640 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g002869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005491 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058970 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30718 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12064 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23810 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27470 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g38565 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34744.t1 Aspi01Gene34744 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34792.t1 Aspi01Gene34792 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26543 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g37893 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g75269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08424 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
LOC_Os03g62400.1 LOC_Os03g62400 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
LOC_Os04g14450.1 LOC_Os04g14450 Pentatricopeptide repeat-containing protein At4g14820... 0.04 OrthoFinder output from all 47 species
Len_g04350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04746 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g10885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18538 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18873 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29296 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g33284 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g33524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g40021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40128 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g43662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11341 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g21424 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23110 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g32947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41095 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41276 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45877 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g46019 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g38675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30359 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53022 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g57671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo110422 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.06 OrthoFinder output from all 47 species
Tin_g26504 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g43745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 137 183
IPR002885 Pentatricopeptide_repeat 35 81
IPR002885 Pentatricopeptide_repeat 9 32
IPR002885 Pentatricopeptide_repeat 213 235
IPR002885 Pentatricopeptide_repeat 111 133
No external refs found!