Msp_g19376


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19376
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.05 OrthoFinder output from all 47 species
Adi_g039747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080993 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05696 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06397 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18769 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19255 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19869 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54931 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g63667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08755 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68104 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03152.t1 Aspi01Gene03152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22090.t1 Aspi01Gene22090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0120.g046799 No alias not classified & original description: CDS=1-2385 0.06 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05305 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g06404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34331 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67769 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g76301 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.06 OrthoFinder output from all 47 species
Ceric.04G068300.1 CRR22, Ceric.04G068300 not classified & original description: pacid=50630217... 0.06 OrthoFinder output from all 47 species
Ceric.05G019900.1 CRR22, Ceric.05G019900 not classified & original description: pacid=50578663... 0.05 OrthoFinder output from all 47 species
Ceric.10G043800.1 Ceric.10G043800 not classified & original description: pacid=50613534... 0.05 OrthoFinder output from all 47 species
Ceric.10G077700.1 Ceric.10G077700 not classified & original description: pacid=50611965... 0.1 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.05 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.05 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.03 OrthoFinder output from all 47 species
Ceric.1Z062400.1 Ceric.1Z062400 not classified & original description: pacid=50637425... 0.05 OrthoFinder output from all 47 species
Ceric.1Z110500.1 Ceric.1Z110500 not classified & original description: pacid=50639205... 0.06 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.05 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.07 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.08 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.08 OrthoFinder output from all 47 species
Ceric.35G061000.1 CRR22, Ceric.35G061000 not classified & original description: pacid=50581720... 0.06 OrthoFinder output from all 47 species
Dac_g35266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06748 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07713 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07807 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g17218 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17915 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g18549 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g40120 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40972 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g43238 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g48025 MEF21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g09173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g17698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28398 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28915 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35433 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40646 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03905 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05446 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06656 OTP84 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19047 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g29848 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32044 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g38654 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07329 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13434 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g20232 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30413 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42997 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g57079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57464 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57707 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57727 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57931 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57963 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g63208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63359 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63395 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63397 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63860 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64428 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g65865 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g66342 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09254 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33764 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g44848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14020 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14323 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g24192 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g33276 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g57126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 116 157
IPR002885 Pentatricopeptide_repeat 219 265
IPR002885 Pentatricopeptide_repeat 423 469
IPR002885 Pentatricopeptide_repeat 19 44
IPR002885 Pentatricopeptide_repeat 599 621
IPR002885 Pentatricopeptide_repeat 292 321
IPR002885 Pentatricopeptide_repeat 627 647
IPR002885 Pentatricopeptide_repeat 397 421
IPR002885 Pentatricopeptide_repeat 323 353
No external refs found!