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  5. Msp_g19334

Msp_g19334 (FAD8)


Aliases : FAD8

Description : delta-12/delta-15 fatty acid desaturase & original description: none


Gene families : OG0001987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19334

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000566 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Ceric.09G069900.1 FAD7, FADD,... delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021281.40 FAD7, FADD Lipid metabolism.fatty acid synthesis.fatty acid... 0.01 OrthoFinder output from all 47 species
Gb_07799 FAD8 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Len_g28494 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Lfl_g07016 FAD8 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Pnu_g17714 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Sam_g14813 No alias delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Sam_g39172 No alias delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Spa_g22751 FAD7, FADD delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Zm00001e001309_P002 FAD8, Zm00001e001309 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021863 FAS_N 65 133
IPR005804 FA_desaturase_dom 141 394
No external refs found!