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  5. Msp_g19128

Msp_g19128


Description : component *(PWR) of HDA9-PWR deacetylation complex & original description: none


Gene families : OG0001343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19128
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00114900 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
AT3G52250 No alias Duplicated homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g012037 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Adi_g093352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19843 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Aob_g27923 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Aop_g19007 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029801 No alias lysine-rich arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Cba_g71610 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.14G077400.1 Ceric.14G077400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Ceric.15G065000.1 Ceric.15G065000 component *(PWR) of HDA9-PWR deacetylation complex &... 0.07 OrthoFinder output from all 47 species
Ceric.38G019400.1 Ceric.38G019400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Cre06.g264400 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Dac_g39968 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g04157 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.1 OrthoFinder output from all 47 species
Ehy_g17925 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01016309001 No alias Chromatin organisation.histone modifications.histone... 0.09 OrthoFinder output from all 47 species
Gb_00676 No alias component PWR of HDA9-PWR deacetylation complex 0.03 OrthoFinder output from all 47 species
Gb_13421 No alias component PWR of HDA9-PWR deacetylation complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g03550.1 LOC_Os05g03550 component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species
Len_g59754 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g09069 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
MA_14319g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.09 OrthoFinder output from all 47 species
MA_9049830g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.09 OrthoFinder output from all 47 species
Nbi_g01519 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Nbi_g06341 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Pir_g13639 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.07 OrthoFinder output from all 47 species
Pp3c11_8790V3.1 Pp3c11_8790 Duplicated homeodomain-like superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g08924 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Solyc04g049120.4.1 Solyc04g049120 component PWR of HDA9-PWR deacetylation complex 0.06 OrthoFinder output from all 47 species
Spa_g15715 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Spa_g18287 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Tin_g24813 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e027573_P003 Zm00001e027573 component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Breadthfirst
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 909 951
IPR001005 SANT/Myb 1368 1409
No external refs found!