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  5. Msp_g19097

Msp_g19097


Description : component *(Tic62) of inner envelope TIC translocation system & original description: none


Gene families : OG0001315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19097

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00166490 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.06 OrthoFinder output from all 47 species
AT2G34460 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.13 OrthoFinder output from all 47 species
AT3G18890 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.1 OrthoFinder output from all 47 species
Adi_g056302 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g115349 TROL not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aev_g02963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19236 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15555 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Aob_g10014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08850 No alias component *(Tic62) of inner envelope TIC translocation... 0.16 OrthoFinder output from all 47 species
Aop_g26310 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Azfi_s0506.g073968 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Cba_g34938 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Cba_g37473 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Ceric.1Z144700.1 Ceric.1Z144700 component *(Tic62) of inner envelope TIC translocation... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.51 No alias Uncharacterized protein At2g34460, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cre06.g269050 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Dac_g29054 No alias component *(Tic62) of inner envelope TIC translocation... 0.09 OrthoFinder output from all 47 species
Dac_g33065 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g10309 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g13303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42405 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Ehy_g00919 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ehy_g09011 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g16505 No alias component *(Tic62) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Ehy_g19385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021427001 No alias Uncharacterized protein At2g34460, chloroplastic... 0.02 OrthoFinder output from all 47 species
GSVIVT01031907001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.09 OrthoFinder output from all 47 species
LOC_Os10g01044.1 LOC_Os10g01044 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.04 OrthoFinder output from all 47 species
Len_g21786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45580 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Len_g45581 No alias component *(Tic62) of inner envelope TIC translocation... 0.22 OrthoFinder output from all 47 species
Lfl_g10375 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10429419g0010 No alias Protein TIC 62, chloroplastic OS=Pisum sativum... 0.04 OrthoFinder output from all 47 species
MA_332596g0010 No alias Uncharacterized protein At2g34460, chloroplastic... 0.04 OrthoFinder output from all 47 species
Nbi_g25487 No alias component *(Tic62) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
Ore_g13449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32758 No alias component *(Tic62) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Pir_g42894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12655 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g16820 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007763 No alias not classified & original description: CDS=26-871 0.06 OrthoFinder output from all 47 species
Sam_g16016 No alias component *(Tic62) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Sam_g16522 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g22704 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g35890 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc10g051110.1.1 Solyc10g051110 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.13 OrthoFinder output from all 47 species
Spa_g06152 No alias component *(Tic62) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
Spa_g21915 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g38988 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Zm00001e003804_P002 Zm00001e003804 Uncharacterized protein At2g34460, chloroplastic... 0.08 OrthoFinder output from all 47 species
Zm00001e011593_P001 Zm00001e011593 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 191 349
No external refs found!