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  5. Msp_g19073

Msp_g19073 (HDA3, ATHD2A, HDT1, HD2A)


Aliases : HDA3, ATHD2A, HDT1, HD2A

Description : HD2-type histone deacetylase *(HD2/HDT) & original description: none


Gene families : OG0002165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g19073

Target Alias Description ECC score Gene Family Method Actions
AT5G03740 HDT3, HD2C histone deacetylase 2C 0.02 OrthoFinder output from all 47 species
Adi_g045241 HDT3, HD2C HD2-type histone deacetylase *(HD2/HDT) & original... 0.05 OrthoFinder output from all 47 species
Adi_g082789 No alias HD2-type histone deacetylase *(HD2/HDT) & original... 0.02 OrthoFinder output from all 47 species
Adi_g106676 HDT3, HD2C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23569 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.03 OrthoFinder output from all 47 species
Als_g54155 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.04 OrthoFinder output from all 47 species
Aob_g05943 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.02 OrthoFinder output from all 47 species
Cba_g31332 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.05 OrthoFinder output from all 47 species
Ceric.33G031600.1 HDA3, ATHD2A,... HD2-type histone deacetylase *(HD2/HDT) & original... 0.04 OrthoFinder output from all 47 species
Cre12.g551050 No alias No description available 0.04 OrthoFinder output from all 47 species
Dde_g20303 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g20489 HDA3, ATHD2A, HDT1, HD2A peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033774001 HDT3, HD2C Histone deacetylase HDT1 OS=Solanum chacoense 0.03 OrthoFinder output from all 47 species
Len_g17092 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.04 OrthoFinder output from all 47 species
MA_118767g0010 HDA3, ATHD2A, HDT1, HD2A histone deacetylase (HDT/HD2) 0.03 OrthoFinder output from all 47 species
MA_3905g0010 No alias histone deacetylase (HDT/HD2) 0.03 OrthoFinder output from all 47 species
Nbi_g12444 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.03 OrthoFinder output from all 47 species
Pir_g38029 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13916 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.02 OrthoFinder output from all 47 species
Sam_g33699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g009030.4.1 HDA3, ATHD2A,... histone deacetylase (HDT/HD2) 0.03 OrthoFinder output from all 47 species
Spa_g40541 HDT3, HD2C HD2-type histone deacetylase *(HD2/HDT) & original... 0.02 OrthoFinder output from all 47 species
Tin_g14352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20431 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e027707_P004 HDT3, HD2C,... histone deacetylase (HDT/HD2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041232 NPL 3 92
No external refs found!