Msp_g18615

Description : mTERF-type transcription factor & original description: none

Gene families : OG0004085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004085_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g18615

Target	Alias	Description	ECC score	Gene Family Method
AT2G34620	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
Aev_g03272	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g06498	EMB93, SOLDAT10	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g16455	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g01639	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g16686	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g09464	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010499001	EMB93, SOLDAT10	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
LOC_Os03g24590.1	LOC_Os03g24590	transcription factor (mTERF)	0.05	OrthoFinder output from all 47 species
LOC_Os03g57149.1	LOC_Os03g57149	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Lfl_g06095	EMB93, SOLDAT10	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16465	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g16248	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c25_6960V3.1	Pp3c25_6960	No annotation	0.03	OrthoFinder output from all 47 species
Solyc01g007750.3.1	Solyc01g007750	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Solyc01g109550.2.1	Solyc01g109550	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
Solyc05g007840.3.1	EMB93, SOLDAT10,...	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003690	MTERF	453	577
IPR003690	MTERF	535	693

External Links

No external refs found!

Msp_g18615

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation