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  5. Msp_g17648

Msp_g17648


Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none


Gene families : OG0007954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17648

Target Alias Description ECC score Gene Family Method Actions
Als_g18360 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 OrthoFinder output from all 47 species
Aop_g62345 No alias small subunit of ribulose-1,5-bisphosphat... 0.12 OrthoFinder output from all 47 species
Aop_g68783 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Aop_g68784 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 OrthoFinder output from all 47 species
Cba_g36893 No alias small subunit of ribulose-1,5-bisphosphat... 0.13 OrthoFinder output from all 47 species
Dac_g15046 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Dac_g35392 No alias small subunit of ribulose-1,5-bisphosphat... 0.07 OrthoFinder output from all 47 species
Dcu_g06004 No alias small subunit of ribulose-1,5-bisphosphat... 0.07 OrthoFinder output from all 47 species
Dde_g09063 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Dde_g23301 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Dde_g46381 No alias small subunit of ribulose-1,5-bisphosphat... 0.18 OrthoFinder output from all 47 species
Gb_00391 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Len_g38133 No alias small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Lfl_g04457 No alias small subunit of ribulose-1,5-bisphosphat... 0.08 OrthoFinder output from all 47 species
Tin_g06955 No alias small subunit of ribulose-1,5-bisphosphat... 0.1 OrthoFinder output from all 47 species
Tin_g06956 No alias small subunit of ribulose-1,5-bisphosphat... 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!