Msp_g17120

Description : splicing factor *(SR45a) & original description: none

Gene families : OG0001089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001089_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g17120

Target	Alias	Description	ECC score	Gene Family Method
Dde_g52073	No alias	splicing factor *(SR45a) & original description: none	0.02	OrthoFinder output from all 47 species
Gb_18913	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Mp8g15180.1	No alias	Serine/arginine-rich splicing factor SR45a...	0.04	OrthoFinder output from all 47 species
Nbi_g11813	No alias	splicing factor *(SR45a) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001928	No alias	splicing factor *(SR45a) & original description: CDS=1-888	0.02	OrthoFinder output from all 47 species
Sam_g29180	No alias	splicing factor *(SR45a) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	55	124

External Links

No external refs found!