AMTR_s00002p00041060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.15

Description : Nutrient uptake.copper uptake.regulation.bHLH-Ib iron/copper homeostasis regulator


Gene families : OG_01_0003858 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003858_tree ,
OG_02_0002668 (LandPlants) Phylogenetic Tree(s): OG_02_0002668_tree ,
OG_03_0001945 (SeedPlants) Phylogenetic Tree(s): OG_03_0001945_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00041060
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
MA_68586g0010 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 Archaeplastida
MA_716662g0010 No alias No annotation 0.03 Archaeplastida
MA_93509g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g079650.2.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.04 Archaeplastida
Solyc10g079660.3.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.04 Archaeplastida
Zm00001e018588_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 Archaeplastida
LOC_Os01g72370.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 LandPlants
MA_716662g0010 No alias No annotation 0.02 LandPlants
Solyc10g079650.2.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 LandPlants
Solyc10g079660.3.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 LandPlants
LOC_Os01g72370.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 SeedPlants
Solyc10g079650.2.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 SeedPlants
Solyc10g079660.3.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 48 101
No external refs found!