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Aliases : PTAC3
Description : cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3) & original description: none
Gene families : OG0004426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004426_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G04260 | PTAC3 | plastid transcriptionally active 3 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g41836 | PTAC3 | cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04595 | PTAC3 | cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g10889 | PTAC3 | cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene05913.t1 | PTAC3, Aspi01Gene05913 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene05919.t1 | PTAC3, Aspi01Gene05919 | cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G010500.1 | PTAC3, Ceric.39G010500 | cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g16824 | PTAC3 | cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01026351001 | PTAC3 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g32540.1 | PTAC3, LOC_Os10g32540 | PAP1/TAC3 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g04680.1 | PTAC3 | PAP1/TAC3 cofactor of plastid-encoded RNA polymerase | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g06695 | PTAC3 | cofactor of plastid-encoded RNA polymerase *(PAP1/TAC3)... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g050540.4.1 | PTAC3, Solyc04g050540 | PAP1/TAC3 cofactor of plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e004642_P001 | PTAC3, Zm00001e004642 | PAP1/TAC3 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003034 | SAP_dom | 661 | 692 |
| No external refs found! |