Smo73440 (PACid_15406868)


Aliases : PACid_15406868

Description : 30.11.1 signalling.light.COP9 signalosome AJH1 encodes a protein similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Encodes a subunit of the COP9 complex that is involved in protein deneddylation. Plants with mutations in CSN5A and CSN5B have a de-etiolated phenotype. COP9 signalosome 5A (CSN5A) CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555) BEST Arabidopsis thaliana protein match is: COP9-signalosome 5B (TAIR:AT1G71230.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|519750 : 442.0


Gene families : OG_01_0005813 (Gene family) Phylogenetic Tree(s): OG0005813_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo73440
Cluster HCCA cluster: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT1G71230 CSN5B, CSN5, AJH2 COP9-signalosome 5B 0.02 Gene family
Cpa|evm.model.tig00021435.18 No alias No description available 0.01 Gene family
Cre09.g399178 No alias 30.11.1 signalling.light.COP9 signalosome AJH1 encodes a... 0.02 Gene family
LOC_Os04g56070 Os04g0654700 30.11.1 signalling.light.COP9 signalosome AJH1 encodes a... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!