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Msp_g15993 (UBP23)


Aliases : UBP23

Description : deubiquitinase *(UBP23) & original description: none


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15993

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00205690 UBP23,... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Aev_g09377 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19936 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11975.t1 UBP23, Aspi01Gene11975 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12069 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.67 UBP15 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Cre14.g629300 UBP23 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Ehy_g03370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10823 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g03220.1 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ppi_g08769 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09289 No alias deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05216 UBP25 deubiquiTinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 110 408
No external refs found!