Msp_g15729

Description : not classified & original description: none

Gene families : OG0000158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000158_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g15729

Target	Alias	Description	ECC score	Gene Family Method
Adi_g044329	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g32847	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g16065	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene03957.t1	Aspi01Gene03957	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene07345.t1	Aspi01Gene07345	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene08107.t1	Aspi01Gene08107	transcriptional repressor *(TIE/SPL) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene28332.t1	Aspi01Gene28332	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene29295.t1	Aspi01Gene29295	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene69610.t1	CLPR1, SVR2,...	non-proteolytic core component *(ClpR) of chloroplast...	0.04	OrthoFinder output from all 47 species
Cba_g06322	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g11589	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g22778	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g25826	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g66296	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g21072	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g28583	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g03309	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Len_g06280	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g46572	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g03606	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g42118	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g53703	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002941	DNA_methylase_N4/N6	355	411

External Links

No external refs found!

Msp_g15729

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation