Msp_g15715 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15715

Target Alias Description ECC score Gene Family Method Actions
Als_g14110 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24699 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26356 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33306.t1 Aspi01Gene33306 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.18G016400.1 Ceric.18G016400 not classified & original description: pacid=50620952... 0.03 OrthoFinder output from all 47 species
Ceric.20G043500.1 LOP1, TRN1,... not classified & original description: pacid=50566189... 0.04 OrthoFinder output from all 47 species
Dac_g05356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28571 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28623 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40817 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43211 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31160 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_94605g0010 LOP1, TRN1 Protein TORNADO 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g07082 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42088 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39802 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20985 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45781 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!