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  5. Msp_g15679

Msp_g15679 (PAL4)


Aliases : PAL4

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15679
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Aev_g37684 ATPAL1, PAL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39212 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43680 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07512 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20991 ATPAL2, PAL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30887 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Als_g50299 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11634 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0009.g011807 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2211 0.06 OrthoFinder output from all 47 species
Cba_g04033 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22478 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G008100.1 PAL4, Ceric.28G008100 EC_4.3 carbon-nitrogen lyase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g36866 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016257001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
GSVIVT01024305001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43800.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
MA_44561g0010 PAL4 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Mp4g03590.1 PAL4 phenylalanine ammonia lyase (PAL) 0.02 OrthoFinder output from all 47 species
Nbi_g06459 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08420 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26446 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18294 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c10_21810V3.1 PAL4, Pp3c10_21810 phenylalanine ammonia-lyase 4 0.01 OrthoFinder output from all 47 species
Pp3c19_13690V3.1 PAL4, Pp3c19_13690 phenylalanine ammonia-lyase 4 0.01 OrthoFinder output from all 47 species
Pp3c21_7640V3.1 ATPAL2, PAL2, Pp3c21_7640 phenylalanine ammonia-lyase 2 0.02 OrthoFinder output from all 47 species
Pp3c24_13110V3.1 PAL4, Pp3c24_13110 phenylalanine ammonia-lyase 4 0.01 OrthoFinder output from all 47 species
Spa_g23160 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26458 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10052 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 75 550
No external refs found!