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  5. Msp_g15614

Msp_g15614


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15614

Target Alias Description ECC score Gene Family Method Actions
Als_g20831 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34200.t1 Aspi01Gene34200 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50169.t2 Aspi01Gene50169 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 243 266
IPR002885 Pentatricopeptide_repeat 276 304
IPR002885 Pentatricopeptide_repeat 479 508
IPR002885 Pentatricopeptide_repeat 540 572
IPR002885 Pentatricopeptide_repeat 579 628
IPR002885 Pentatricopeptide_repeat 307 355
IPR002885 Pentatricopeptide_repeat 649 697
IPR002885 Pentatricopeptide_repeat 375 420
No external refs found!