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  5. Msp_g15587

Msp_g15587 (TTN7, SMC3)


Aliases : TTN7, SMC3

Description : component *(SMC3/TTN7) of cohesin regulator complex & original description: none


Gene families : OG0003981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15587

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00198810 TTN7, SMC3,... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
AT2G27170 TTN7, SMC3 Structural maintenance of chromosomes (SMC) family protein 0.03 OrthoFinder output from all 47 species
Als_g10466 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Dac_g05785 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01033181001 TTN7, SMC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
MA_182035g0010 TTN7, SMC3 Structural maintenance of chromosomes protein 3... 0.03 OrthoFinder output from all 47 species
Zm00001e032592_P001 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 2 1181
IPR010935 SMC_hinge 522 633
No external refs found!