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  5. Msp_g15568

Msp_g15568 (TTN8, ATSMC1, SMC1)


Aliases : TTN8, ATSMC1, SMC1

Description : component *(SMC1/TTN8) of cohesin regulator complex & original description: none


Gene families : OG0004293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15568

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00208430 TTN8, ATSMC1,... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
AT3G54670 TTN8, ATSMC1, SMC1 Structural maintenance of chromosomes (SMC) family protein 0.04 OrthoFinder output from all 47 species
Aev_g04880 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Ala_g02668 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Aob_g04491 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Cba_g04090 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Ceric.32G063300.1 TTN8, ATSMC1,... component *(SMC1/TTN8) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Dac_g13201 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g05826 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g01679 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01028343001 TTN8, ATSMC1, SMC1 Cell cycle.mitosis and meiosis.sister chromatid... 0.05 OrthoFinder output from all 47 species
LOC_Os12g44390.1 TTN8, ATSMC1,... component SMC1/TTN8 of cohesin regulator complex 0.05 OrthoFinder output from all 47 species
MA_10429667g0010 TTN8, ATSMC1, SMC1 Structural maintenance of chromosomes protein 1... 0.02 OrthoFinder output from all 47 species
Ppi_g01407 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Solyc06g083870.3.1 TTN8, ATSMC1,... component SMC1/TTN8 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Tin_g02901 TTN8, ATSMC1, SMC1 component *(SMC1/TTN8) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e003843_P001 TTN8, ATSMC1,... component SMC1/TTN8 of cohesin regulator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR010935 SMC_hinge 517 633
IPR003395 RecF/RecN/SMC_N 10 1202
No external refs found!