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  5. Msp_g15520

Msp_g15520 (GC5)


Aliases : GC5

Description : Golgin-type membrane tethering protein *(GC5/TMF) & original description: none


Gene families : OG0003150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15520

Target Alias Description ECC score Gene Family Method Actions
AT1G79830 GC5 golgin candidate 5 0.04 OrthoFinder output from all 47 species
Als_g09947 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.05 OrthoFinder output from all 47 species
Aob_g16762 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01038690001 GC5 Vesicle trafficking.target membrane tethering.Golgi... 0.03 OrthoFinder output from all 47 species
MA_9882g0010 GC5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g06100.1 GC5 golgin (GC5/TMF) 0.03 OrthoFinder output from all 47 species
Ore_g05368 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
Solyc06g066610.4.1 GC5, Solyc06g066610 golgin (GC5/TMF) 0.07 OrthoFinder output from all 47 species
Zm00001e026507_P001 GC5, Zm00001e026507 golgin (GC5/TMF) 0.04 OrthoFinder output from all 47 species
Zm00001e026510_P001 GC5, Zm00001e026510 Golgin candidate 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032402_P001 GC5, Zm00001e032402 golgin (GC5/TMF) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR022091 TMF_TATA-bd 820 920
IPR022092 TMF_DNA-bd 404 471
No external refs found!