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  5. Msp_g15480

Msp_g15480


Description : ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none


Gene families : OG0002525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15480

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00110960 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00041p00198080 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
Dde_g23565 No alias ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015355001 No alias External stimuli response.biotic... 0.05 OrthoFinder output from all 47 species
LOC_Os01g12930.1 LOC_Os01g12930 ubiquitin E3 ligase (CERBERUS/LIN) 0.03 OrthoFinder output from all 47 species
MA_1171557g0010 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.06 OrthoFinder output from all 47 species
MA_15009g0010 PUB26 Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.06 OrthoFinder output from all 47 species
Ore_g32668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19454 No alias ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33588 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e016398_P001 Zm00001e016398 ubiquitin E3 ligase (CERBERUS/LIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 543 613
IPR001680 WD40_repeat 1292 1326
No external refs found!