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  5. Msp_g15478

Msp_g15478


Description : not classified & original description: none


Gene families : OG0001249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15478

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00102010 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Ala_g26817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21390 No alias regulatory component *(AIPP2) of chromatin silencing... 0.02 OrthoFinder output from all 47 species
Ceric.24G003900.1 Ceric.24G003900 not classified & original description: pacid=50628664... 0.03 OrthoFinder output from all 47 species
GSVIVT01024330001 No alias No description available 0.03 OrthoFinder output from all 47 species
Ore_g41526 No alias regulatory component *(AIPP2) of chromatin silencing... 0.03 OrthoFinder output from all 47 species
Smo439529 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g49012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!