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  5. Msp_g15434

Msp_g15434


Description : regulatory protein *(TMS) of vesicle trafficking & original description: none


Gene families : OG0002049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15434
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT5G05570 No alias transducin family protein / WD-40 repeat family protein 0.04 OrthoFinder output from all 47 species
Ala_g07812 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Aob_g10691 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Aob_g25755 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Ceric.04G073600.1 Ceric.04G073600 regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Dcu_g05823 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
MA_7753240g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g09160.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Smo413341 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g05717 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Zm00001e035944_P002 Zm00001e035944 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 1041 1081
IPR001680 WD40_repeat 230 258
No external refs found!