1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g15420

Msp_g15420 (HUB2)


Aliases : HUB2

Description : E3 ubiquitin ligase *(HUB) & original description: none


Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15420

Target Alias Description ECC score Gene Family Method Actions
Als_g01150 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09718 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018223001 RDO4, HUB1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Ore_g35898 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10428 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08099 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!