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  5. Msp_g15381

Msp_g15381


Description : endonuclease *(FAN1) & original description: none


Gene families : OG0005038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15381
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00111500 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
Dcu_g15344 No alias endonuclease *(FAN1) & original description: none 0.03 OrthoFinder output from all 47 species
Smo418853 No alias Cell cycle.mitosis and meiosis.meiotic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014883 VRR_NUC 917 1042
IPR014905 HIRAN 277 358
No external refs found!