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  5. Msp_g15317

Msp_g15317


Description : not classified & original description: none


Gene families : OG0004827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15317
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Ala_g11942 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g17861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10723 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.08G049600.1 Ceric.08G049600 not classified & original description: pacid=50638367... 0.09 OrthoFinder output from all 47 species
Ceric.08G049900.1 Ceric.08G049900 not classified & original description: pacid=50638950... 0.04 OrthoFinder output from all 47 species
Ceric.08G050000.1 Ceric.08G050000 not classified & original description: pacid=50637967... 0.03 OrthoFinder output from all 47 species
Ceric.08G050100.1 Ceric.08G050100 not classified & original description: pacid=50638776... 0.03 OrthoFinder output from all 47 species
Dac_g08007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05401 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g14911 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g29083 ATCSLA14, CSLA14 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g20069 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g33117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0205.g025730 CSLA02, ATCSLA2,... not classified & original description: CDS=116-2359 0.04 OrthoFinder output from all 47 species
Smo448970 No alias Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!