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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g15230 | |
| Cluster | HCCA: Cluster_126 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00230160 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00187000 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00094190 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g04780,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G14470 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g002608 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009422 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g066672 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04216 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g04425 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06035 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14757 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g15782 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g18452 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19046 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g61080 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g27914 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023505 | No alias | not classified & original description: CDS=32-2620 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0074.g037385 | OTP84 | not classified & original description: CDS=80-2584 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0731.g084096 | No alias | not classified & original description: CDS=1-3909 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05286 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g05443 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20760 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g29885 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020553.200 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g44353 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09752 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36429 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g10023 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010869001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021403001 | No alias | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38938 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g72930.1 | LOC_Os01g72930 | Pentatricopeptide repeat-containing protein At3g13880... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g20190.1 | LOC_Os03g20190 | Pentatricopeptide repeat-containing protein At1g56690,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18314 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g26572 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g55833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05012 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07288 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g33290 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23127 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g17481 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g32492 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63843 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19854 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20675 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06412 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55456 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59316 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g000958 | No alias | not classified & original description: CDS=1-3216 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0133.g022243 | No alias | not classified & original description: CDS=1-1908 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo110549 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g116840.3.1 | Solyc03g116840 | RNA editing factor (OTP81) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g007040.1.1 | Solyc09g007040 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g090220.3.1 | Solyc09g090220 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53279 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g19427 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g30134 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e014825_P001 | Zm00001e014825 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 116 | 163 |
| IPR002885 | Pentatricopeptide_repeat | 318 | 364 |
| IPR002885 | Pentatricopeptide_repeat | 418 | 466 |
| IPR002885 | Pentatricopeptide_repeat | 217 | 263 |
| IPR002885 | Pentatricopeptide_repeat | 519 | 567 |
| IPR002885 | Pentatricopeptide_repeat | 290 | 315 |
| IPR002885 | Pentatricopeptide_repeat | 594 | 622 |
| IPR002885 | Pentatricopeptide_repeat | 191 | 216 |
| No external refs found! |