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  5. Msp_g15114

Msp_g15114 (MYBC1)


Aliases : MYBC1

Description : not classified & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15114
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00128190 evm_27.TU.AmTr_v1... Transcription factor LUX OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G67710 ARR11 response regulator 11 0.06 OrthoFinder output from all 47 species
AT2G01760 RR14, ARR14 response regulator 14 0.02 OrthoFinder output from all 47 species
AT2G40970 MYBC1 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G10760 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g021942 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37659 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Aob_g14548 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g58078 MYBC1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27417.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65339.t2 ARR1, RR1,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69302.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
Cba_g59744 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G063700.1 ARR1, RR1,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G046400.1 ARR11, Ceric.04G046400 subgroup ARR-B transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.17G049600.1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ceric.1Z080900.1 MYBC1, Ceric.1Z080900 not classified & original description: pacid=50607904... 0.03 OrthoFinder output from all 47 species
Ceric.31G008400.1 Ceric.31G008400 subgroup ARR-B transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cre02.g083750 LUX, PCL1 Transcription factor BOA OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g02330 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47938 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g04897 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g08460 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12820 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08391 LUX, PCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13817 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ehy_g20630 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007550001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
GSVIVT01010627001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
GSVIVT01029177001 ARR10, RR10 RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
Gb_27043 No alias Two-component response regulator ORR22 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os10g32600.1 RR14, ARR14,... Two-component response regulator EHD1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Lfl_g24241 No alias MYB-RELATED transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_17547g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g25181 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g34362 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43788 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03823 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Pnu_g23834 ARR10, RR10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863 MYBC1 not classified & original description: CDS=1-1491 0.03 OrthoFinder output from all 47 species
Solyc07g005140.4.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Spa_g18223 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51591 ARR10, RR10 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21279 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013844_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 203 251
No external refs found!